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  • The Internet Journal of Microbiology
  • Volume 7
  • Number 1

Original Article

Partial Purification and Characterization of Intracellular Alkaline Phosphatase from Newly Isolated Strain of Bacillus subtilis KIBGE-HAS

S Ali ul Qader, S Iqbal, Z Niazi

Keywords

alkaline phosphatase, bacillus sp., characterization, purification

Citation

S Ali ul Qader, S Iqbal, Z Niazi. Partial Purification and Characterization of Intracellular Alkaline Phosphatase from Newly Isolated Strain of Bacillus subtilis KIBGE-HAS. The Internet Journal of Microbiology. 2008 Volume 7 Number 1.

Abstract

The soluble alkaline phosphatase isolated from Bacillus subtilis KIBGE-HAS was extracted after lysis of the cell through tissue homogenizer and partially purified by 40% solid (NH4)2 SO4 saturation. Characterization & kinetic studies of the enzyme showed maximum activity at pH 8.0 in Tris/HCl environment, while the optimal temperature for activity was noted 37°C. Enzyme substrate kinetic data was analyzed by using lineweaver-Burk plot.its apparent Km for p-nitrophenyl phosphate was 2.747mM and the Vmax was calculated 3299U/L. This partially purified enzyme was also subjected to denaturing SDS-PAGE that showed 3-protein band after staining.

 

Abbreviations: (APs) Alkaline Phosphatase, (PNP) p-nitrophenyl phosphate, (DEA)Diethanol amine

GenBank Accession: EU819145 (16S rRNA gene sequencing for Bacillus subtilis KIBGE-HAS

Introduction

Alkaline phosphatase (EC 3.1.3.1) is a broad term associated with non-specific phosphomonoesterase activity with activity optima at alkaline pH. It is a homodimeric metalloenzyme which hydrolyzes the phosphomonoester into inorganic phosphate and corresponding alcohol (1,2). Organic and inorganic phosphates are essential component of living organism; therefore it is a valuable reagent for the removal of terminal monoesterified phosphate from ribo-oligonucleotide, deoxyribo-oligonucleotides, alkaloids and proteins etc. (3,4).

Three types of alkaline phosphatase have been found in human, liver/kidney/ bones alkaline phosphatase, intestinal alkaline phosphatase and placental alkaline phosphatase. Serum alkaline phosphatase is markedly elevated in different types of liver and bones diseases while moderate elevation is noted in congestive heart failure, hyperparathyroidism and intestinal diseases.

Alkaline phosphatase have also been found in variety of micro-organism including E.coli (5) Pseudomonas (6), Aerobacter (7) and Bacillus species (8). In all these bacteria alkaline phosphatase found in periplasmic space, external to the cell membrane (9) and induces under low phosphate concentration that indicates that bacterial alkaline phosphatase is also involves in phosphate metabolism (10).

Alkaline phosphatase has become an important tool in molecular cloning and DNA sequencing. It also used as an important part of diagnostic kits component of different ELISA base kits (3).Bacterial alkaline phosphatase is used more commonly in research because it is comparatively resistant to inactivation, denaturation, degradation and higher rate of activity (3). Due to its so many industrial uses, it is necessary to purify it on large scale for commercial and research purpose.

In present study the partial purification and characterization of intracellular alkaline phosphatase (AP) enzyme from newly isolated strain of Bacillus subtilis KIBGE-HAS was carried out.

Materials and Method

Organism

Bacillus specie used in this study was isolated from the air and its growth was optimized at 37°C at pH 7. The stock culture was maintained on nutrient agar slant containing 2 % agar and pH was adjusted to 7.0.

Buffers

Buffers that used through out in this study was as fallows; 50 Mm Tris/HCl buffer (p H 8.0), 50 m M phosphate buffer (p H 7.5), DEA buffer ( p H 8.0), Glycine/NaOH buffer (p H 8.0).

Medium for enzyme Production

The growth medium used for the production of intracellular alkaline phosphatase was composed of: Peptone 5.0 g/l, yeast extract 1.0 g/l, starch 15.0 g/l, MgSO4 0.5 g/l, NaCl 0.5 g/l, CaCl2 0.01 g/l. The medium was adjusted to pH 7.0 and then autoclaved.

Extraction of Intracellular alkaline phosphatase

For the production of alkaline phosphatase, 10ml of 24hrs culture inoculum was transferred to 90ml medium and incubated for 24hrs at 37°C. After 24hrs of incubation the cells were removed from broth and washed 2-3 times with phosphate buffer. Washed cells were resuspended in 20ml of the same buffer and homogenized for 10 minutes using Ultra Turrax T-25 Basic 9IKA. Homogenized cells were centrifuged at 10,000 x g for 15min. at 2◦C and alkaline phosphatase activity was performed in supernatant and cells debris was discarded.

Enzyme Assay

Alkaline phosphatase activity was measured spectrophotometrically by incubating 10µl of enzyme solution with 1000µl of 20 mM p-Nitrophenyl phosphate (prepared in 50mM Tris-HCl buffer) at 37°C for 2 minutes by detecting the concentration of p-nitrophenol, liberated from p-nitrophenyl Phosphate during reaction at 405nm (1, 11, 12).

Enzyme Units

One unit of alkaline phosphatase activity is defined as, “the amount of enzyme that liberates 1µmole p-nitrophenol from p-nitrophenyl phosphate in one minute at 37 ºC”. The specific activity is given as U/mg protein.

Protein Determination

Total protein level was measured by the Lowry et al. method (13) by using bovine serum albumin (250µg/ml) as standard.

Purification of Intracellular Alkaline Phosphatase

Crude soluble enzyme (20ml) was brought to 40% saturation by the addition of solid ammonium sulphate (NH4)2 SO4 with continuous stirring for 5 minutes and then kept at 2- 8°C for 1hr (15). The obtained protein precipitates were separated out by centrifugation (16,000xg for 15 minutes) and dissolved in 10ml phosphate buffer (pH 7.5). A dialysis tube was used for the concentration of enzymatic protein by removing the salts for 24 hours at 2C using same buffer.

Molecular Mass Determination by SDS-PAGE

Partial purified protein was resolved on 10% polyacrylamide gel electrophoresis according to the method of Laemmli (14) and then gel was stained with Coomassie Blue R-250.

Result and Discussion

Extraction of Intracellular enzyme

After initial step of cell homogenization 883 U/L of alkaline phosphatase activity was detected (table1) which supported the idea that tissue homogenizer can be used for the extraction of intracellular enzyme. In the previous studies lysozyme & DNase have been used for the extraction of intracellular enzyme but these lytic enzymes cannot be used again and again. Enzymatic treatment is also time consuming because it requires 3-10 hrs incubation for the cells lysis (9) while tissue homogenizer required 10-15 minutes for the extraction of enzyme from cells lysis.

Purification of Alkaline Phosphatase

For the purification of alkaline phosphatase, ammonium sulphate was used for the precipitation of enzyme and after precipitation enzyme activity was increased upto1737 U/L that reflects that the specific protein-protein aggregation became predominant over protein-water and protein-salt interaction.

After salt precipitation the enzyme was dialyzed and the activity of enzyme increased upto 1689 U/L with specific activity of 11.29 U/mg (table1) and purification reaches to 5.1 fold.

Figure 1
Table 1: Partial Purification of Alkaline Phosphatase

Molecular Mass Determination

Electrophoretic analysis of intracellular alkaline phosphatase from Bacillus subtilis KIBGE-HAS been carried out after partial purification. Molecular mass was determined by comparing the relative mobility of the protein with the molecular weight markers (Figure 1, Lane B). Three protein bands were detected in the partially purified sample (Figure 1, Lane A) and the estimated molecular weight of protein bands is approximately 59,500 Da , 23,700 Da and 22,300 Da. Alkaline phosphatase exist in both dimeric and monomeric forms, the homodimeric forms of alkaline phosphatase, with a monomer molecular mass of 54,000 Da have been previously reported in E.pyrococcus abyssi (1,15,16). The SDS-PAGE of B. stearothermophilus alkaline phosphatase showed a single protein band of 32,000 Da (17).

Figure 2
Figure: SDS-PAGE Profile of Alkaline Phosphatase: Lane M, Molecular weight standards (kDa): Lane A, partially purified Alkaline Phosphatase (Coomassie Blue staining)

Effect of Temperature on Enzyme Activity

The effect of temperature on the partially purified enzyme was observed by incubating the enzyme on different temperatures ranging from 25°C-50°C for 2 min. The results showed that the enzyme activity was increased with the increase in temperature and optimum activity was observed at 37°C (9). Further increase in temperature, resulted in the decrease of enzyme activity and 20 % activity was loss at 50°C (Fig.2). The high temperature increases the kinetic energy of the molecules that break the bond that holding the active amino acid resulting in a loss of enzyme activity (18).

Figure 3
Figure 2: Effect of temperature on intracellular alkaline phosphatase activity

Effect of pH on Enzyme Activity

The activity profile of the enzyme on different pH ranging from 7.5 to 10 was performed. The Fig-3 showed that the maximum enzyme activity (3629 U/L) was found at pH 8.0 and as the pH increases the sharp decrease in activity was observed and only 30 % enzyme activity was detected at pH 10 (9,19). It was reported previously that maximum activity of calf intestinal alkaline phosphatase was found in the range of 10 to 10.1 (20) .The increase in pH causes internal electrostatic repulsion or loss of internal electrostatic attraction of the charges on the side chains of amino acid and due to which proteins opens up and resulting in decrease of enzyme activity, therefore when the pH increased from the optimum pH the activity of enzyme decreased.

Figure 4
Figure 3: Effect of pH on intracellular alkaline phosphatase activity

Effect of Buffer on Enzyme Activity

Enzyme assay was carried out with three different buffers of 50 mM (Tris-HCl, DEA & Glycine-NaOH buffer) of same pH (8.0) for the selection of appropriate buffer to get the maximum enzyme activity. It was observed that the Tris-HCl environment (1,17,19) is optimum for the maximum enzyme activity(1049U/l) while Glycine-NaOH and DEA buffer 30% and 83% activity was detected respectively with reference to the activity in Tris-HCl buffer (Fig.4).

Figure 5
Figure 4: Effect of buffers on intracellular alkaline phosphatase activity

Effect of Reaction Time on Enzyme Activity

Enzyme substrate mixture was incubated at 37°C for one minute to five minutes interval and maximum activity was observed when enzyme substrate mixture was kept for 2.0 minute at 37°C (Fig 5). With the lengthening of incubation time enzyme activity was markedly decreased and only 37% activity was detected after 5.0 minutes. It might be due to the thermal labile nature of the enzyme with reference of time and as the time increases the temperature start breaking the bonds between the two amino acids (9).

Figure 6
Figure 5: Effect of reaction time on intracellular alkaline phosphatase activity

Effect of substrate concentration

Alkaline phosphatase has high substrate specificity to p-nitro phenyl phosphate (1,12). It was observed that the alkaline phosphatase activity was increased with the increase in substrate concentration and maxima were attained at 20mM-substrate concentration (Fig 6) but no further increased in alkaline phosphatase activity was observed with increase in substrate concentration beyond 20mM. The Michealis constant for p-Nitro phenyl phosphate at pH 8.0 was calculated by Lineweaver-Burk plot and Km for PNP was 2.74 mM and Vmax 3299 U/L (Fig 6a & 6b). The Km value for the purified alkaline phosphatase of B. licheniformis was calculated 6.05×10-4M (9). Some workers also reported that Km value of alkaline phosphatase from B. stearothermophilus was 1.11 mM (17).

Figure 7
Figure 6A: Substrate Saturation Kinetics of Intracellular Alkaline Phosphatase

Figure 8
Figure 6B: Lineweaver Burk plot of Intracellular Alkaline Phosphatase

References

1. Robert, R.B. and Evan, R.K. (2003). Characterization of a monomeric E.coli alkaline phosphatase formed upon a single amino acid substitution. J. Biol. Chem. 278: 23497-23501.
2. Trowsdale, J., Martin, D., Bicknell, D. and Campbell, I. (1990). Alkaline Phosphatase. Biochem. Soc. Trans. 18: 178-180.
3. Reid, T. and Wilson, I. (1971). E.coli Alkaline Phosphatase, The Enzyme, P. Boyer, Academic press, New York. 373, 3rd edition, vol.4.
4. Fermley, N.H. (1971). The Enzyme. 3rd edition, vol.4: 417-474.
5. Torriani, A. (1968). Alkaline phosphatase subunit and their dimerization in vivo, J. Bacteriol. 96: 1200-1207.
6. Friedberg, I. and Avigad, G. (1967). Some properties of alkaline phosphatase of Ps. flourescens. Eur. J. Biochem. 1: 193-198.
7. Wolfenden, R. and Spence, G. (1967). Depression of phosphomonoesterase and phosphodiesterase activities in Aerobacter aerogenes. J. Biochim. Biophys. Acta, 46: 296-298.
8. Takeda, K. and Tsugita, A. (1967). Phosphoesterase of B. subtilis. II crystallization and properties of alkaline phosphatase. J. Biochem. 61: 231-241.
9. Hulett-cowling, F.M. and Campbell, L. (1971). Purification and properties of an alkaline phosphate of B. licheniformis. J. Biochem. 10: 1364-1371.
10. Mc. Comb, R.B., Bowers, G.N. and Posen, S. (1979). Alkaline phosphatase. Plenum. Press, New York.
11. Garen, A. and Levinthal, C., (1960). Fine Structure genetic and chemical study of enzyme alkaline phosphatase of E.coli. Part I: .Purification and characterization of alkaline phosphatase. J. Biocim. et Biophys. Acta 38: 470-473.
12. Sebastien, Z., Jean, L.R., Didier, H., Yannick, G., Joseph, B, and Jacques, D. (2001). Characterization of highly thermo-stable alkaline phosphatase from the Euryarchaeon pyrococus abyssi. J. Appl. Env. Microbiol. 67: 4504-4511.
13. Lowry, O.H., Rosebrough, N.J., Farr, A.L. and Randall, R.J. (1951). Protein measurement with the Folin-Phenol reagents. J. Biol. Chem. 193: 265-275.
14. Laemmli, U.K. (1970). Clevage of structural Protein during the assembly of the head of bacteriophage. Nature 227: 680-685.
15. Hulett, F.M., Bookstein, C. and Jensen, K. (1990). Evidence for two structural gene for alkaline phosphatase in B. subtilis. J. Bacteriol. 172: 735-740.
16. Hulett, F.M., Kim, E.E., Bookstein, C., Kapp, N.V., Edward, C.W. and Wyckoff, H.W. (1991). B. subtilis alkaline phosphatase III and IV cloning sequencing and comparison of deduced amino acid sequence with E.coli alkaline phosphatase three dimension structure, J. Biol. Chem. 266: 1077-1084.
17. Mori, S., Okamato, M., Nishibori, M., Ichimura, M., Sakyama, J. and Endho, H. (1999). Purification and characterization of alkaline phosphatase from B. stearothermophilus. J. Biotech. Appl. Biochem. 29: 235-239.
18. Bryan, L.W. and Keith W. (1981). General principles of biochemical investigation. Principles and techniques of practical biochemistry, 2nd edition, p. 32-34.
19. Rute, S.M., Juan, F.M., Alicia, M. and Paloma, L. (2001). Substrate analysis and molecular cloning of the extracellular alkaline phosphatase of Streptomyces griseus. J. Microbiology, 147: 1525-1533.
20. Oreste, B. Michele, P., Maria, P. and Pietta, P.G. (1975). Affinity chromatography purification of alkaline phosphatase from calf intestine. J. Biochem. 151: 291-296.

Author Information

Shah Ali ul Qader
Institute of Sustainable Halophyte Utilization, University of Karachi, Karachi, Pakistan

Samina Iqbal
Pharmaceutical Research Centre, PCSIR Laboratories complex, Karachi, Pakistan

Zaman Niazi
Pharmaceutical Research Centre, PCSIR Laboratories complex, Karachi, Pakistan

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